ToyCaBindingKinetic_SU2015_DCN

ToyCaBindingKinetic_SU2015_DCN#

class braincell.ion.ToyCaBindingKinetic_SU2015_DCN(size, temp=Quantity(309.15, 'K'), kf=Quantity(2., '1 / (mM * ms)'), kb=Quantity(0.5, 'kHz'), Btot=Quantity(1., 'mM'), Co=None, Ci_initializer=Quantity(0.1, 'mM'), BC_initializer=Quantity(0., 'mM'), solver='rk4', substeps=5, name=None, **channels)#

Minimal reversible calcium-binding toy for KineticIon validation.

The mechanism models one reversible buffering step:

\[Ca_i + B \rightleftharpoons BC\]

with the conserved pool:

\[B + BC = B_{tot}\]

B is solved algebraically from the conservation rule while Ci and BC are integrated as differential species.