Sequence

class braintools.cogtask.Sequence(*phases, name='Sequence')

Sequential composition of phases.

Created via: - Sequence(phase1, phase2, phase3) - phase1 >> phase2 >> phase3 - concat([phase1, phase2, phase3])

Examples

>>> seq = Sequence(Fixation(100*u.ms), Stimulus(500*u.ms))
>>> # Equivalent to:
>>> seq = Fixation(100*u.ms) >> Stimulus(500*u.ms)

children()

Return the immediate child phases of a compound phase.

Leaf phases return []. Subclasses like Sequence, Repeat, Parallel, If, Switch, While override this so that the Task can traverse the whole tree to bind features.

Return type:

List[Phase]

encode_inputs(ctx)

Fill ctx.inputs[phase_start:phase_end] with input encoding.

Called once per phase after duration is determined. Must modify ctx.inputs in-place.

Parameters:

ctx (Context) – Context with input buffer and trial state.

Return type:

None

encode_outputs(ctx)

Fill ctx.outputs[phase_start:phase_end] with target encoding.

Called once per phase after duration is determined. Must modify ctx.outputs in-place.

Parameters:

ctx (Context) – Context with output buffer and trial state.

Return type:

None

execute(ctx)

Execute all child phases sequentially.

Return type:

None

get_duration(ctx)

Get total duration by summing child phases.

Return type:

int

max_steps(ctx)

Static upper bound on this phase’s length in timesteps.

Must return a Python int with no dependence on traced values. Used by Task in variable-length mode to size shape-stable buffers. The default delegates to get_duration which is correct for fixed-duration phases. Variable-duration phases (e.g. those wrapping TruncExp/UniformDuration) override this to return the truncation upper bound divided by ctx.dt.

Parameters:

ctx (Context) – A stub or trial context providing ctx.dt. The default implementation does not read ctx.rng or trial state.

Returns:

Upper bound on number of timesteps for this phase.

Return type:

int

step_count(ctx)

Traced actual length of this phase in timesteps.

Returns a jax.Array int32 scalar. May depend on ctx[...] values populated by trial_init. Must satisfy 0 <= step_count(ctx) <= max_steps(ctx) for every trial.

The default returns a static value equal to get_duration; that is correct for any phase whose actual length matches its upper bound. Variable-duration phases override this to compute the traced length from ctx state without any int(...) cast.

Return type:

Array